Found 155 results
In Press
Bozem, M., P. Knapp, V. Mirčeski, E. J. Slowik, I. Bogeski, R. Kappl, C. Heinemann, and H. Markus, "Electrochemical Quantification of Extracellular Local H2O2 Kinetics Originating from Single Cells ", Antioxidants & Redox Signaling, In Press.
2018
Werner, M., T. Auth, P. A. Beales, J. Baptiste Fleury, F. Höök, H. Kress, R. C. Van Lehn, M. Müller, E. P. Petrov, L. Sarkisov, et al., "Nanomaterial interactions with biomembranes: Bridging the gap between soft matter models and biological context", Biointerphases, vol. 13, issue 2, 03/2018.
Hafner, A. E., and H. Rieger, "Spatial cytoskeleton organization supports targeted intracellular transport", Biophys. J., vol. 114, pp. 13, 2018.
2017
Stefanic, M., K. Ward, H. Tawfik, R. Seemann, V. Baulin, Y. Guo, J-B. Fleury, and C. Drouet, "Apatite nanoparticles strongly improve red blood cell cryopreservation by mediating trehalose delivery via enhanced membrane permeation", Biomaterials, vol. 140, pp. 138–149, 2017.
Zhou, X., R. Zhao, K. Schwarz, M. Mangeat, E. C. Schwarz, M. Hamed, I. Bogeski, V. Helms, H. Rieger, and B. Qu, "Bystander cells enhance NK cytotoxic efficiency by reducing search time", Scientific Reports, vol. 7, pp. 44357, 2017.
M. Shaebani, R., J. Najafi, A. Farnudi, D. Bonn, and M. Habibi, "Compaction of quasi-one-dimensional elastoplastic materials", Nature Communications , vol. 8, pp. 15568, 2017.
Sandoval-Perez, A., K. Pluhackova, and R. A. Böckmann, "A Critical Comparison of Biomembrane Force Fields: Protein-Lipid Interactions at the Membrane Interface", Journal of Chemical Theory and Computation, 2017.
Spengler, C., N. Thewes, P. Jung, M. Bischoff, and K. Jacobs, "Determination of the nano-scaled contact area of staphylococcal cells", Nanoscale, pp. -, 2017.
Hertel, S., S. Pötschke, S. Basche, J. Delius, W. Hoth-Hannig, M. Hannig, and C. Hannig, "Effect of tannic acid on the protective properties of the in-situ formed pellicle", Caries Res. , vol. 51, pp. 34-45, 2017.
Kensche, A., C. Holder, S. Basche, N. Tahan, C. Hannig, and M. Hannig, "Efficacy of a mouthrinse based on hydroxyapatite to reduce initial bacterial colonisation in situ", Archives of Oral Biology, vol. 80, pp. 18 - 26, 2017.
Spengler, C., N. Thewes, N. Umanskaya, M. Hannig, F. Nolle, M. Bischoff, T. Faidt, and K. Jacobs, "Enhanced adhesion of Streptococcus mutans to hydroxyapatite after exposure to saliva", Journal of Molecular Recognition, pp. e2615, 2017.
Kirsch, J., C. Hannig, S. Pötschke, S. Basche, W. H. Bowen, S. Rupf, S. Trautmann, N. Umanskaya, and M. Hannig, "Enzymology and ultrastructure of the in situ pellicle in caries-active and caries-inactive patients", Caries Res., vol. 51, pp. 109-118, 2017.
Schenkelberger, M., S. Shanak, M. Finkler, E. G. Worst, V. Noireaux, V. Helms, and A. Ott, "Expression regulation by a methyl-CpG binding domain in an E. coli based, cell-free TX-TL system", Physical Biology, vol. 14, pp. 026002, 2017.
Eisenbeis, J., H. Peisker, CS. Backes, S. Bur, S. Hölters, N. Thewes, M. Greiner, C. Junker, EC. Schwarz, M. Hoth, et al., "The extracellular adherence protein (Eap) of Staphylococcus aureus acts as a proliferation and migration repressing factor that alters the cell morphology of keratinocytes.", Int J Med Microbiol., vol. 307(2), pp. 116-125, 02/2017.
Rahbari, M.., S.. Rahlfs, E.. Jortzik, I.. Bogeski, and K.. Becker, "H2O2 dynamics in the malaria parasite Plasmodium falciparum.", PLOS One, 04/2017.
Mohammadi-Kambs, M.., K.. Hölz, M.. M. Somoza, and A.. Ott, "Hamming Distance as a Concept in DNA Molecular Recognition", ACS Omega, vol. 2, pp. 1302-1308, 2017.
Schoppmeyer, R.., R.. Zhao, H.. Cheng, M.. Hamed, C.. Liu, X.. Zhou, EC.. Schwarz, Y.. Zhou, A.. Knörck, G.. Schwär, et al., "Human profilin 1 is a negative regulator of CTL mediated cell-killing and migration", Eur. J. Immunol., vol. 47, pp. 1562-1572, 2017.
Porret, E., L. Sancey, A. Martín-Serrano, M. I. Montañez, R. Seemann, A. Yahia-Ammar, H. Okuno, F. Gomez, A. Ariza, N. Hildebrandt, et al., "Hydrophobicity of Gold Nanoclusters Influences their Interactions with Biological Barriers", Chem. Mater, 08/2017.
Delius, J., S. Trautmann, G. Medard, B. Kuester, M. Hannig, and T. Hofmann, "Label-free quantitative proteome analysis of the surface-bound salivary pellicle", Colloids Surfaces B: Biointerfaces, vol. 152, pp. 68-76, 2017.
Sander, M., H. Dobicki, and A. Ott, "Large Amplitude Oscillatory Shear Rheology of Living Fibroblasts: Path-Dependent Steady States", Biophysical Journal, vol. 113, pp. 1561-1573, 2017.
Hamed, M.., J.. Trumm, C.. Spaniol, R.. Sethi, M.. R. Irhimeh, G.. Fuellen, M.. Paulsen, and V.. Helms, "Linking hematopoietic differentiation to co-expressed sets of pluripotency-associated and imprinted genes and to regulatory microRNA-transcription factor motifs", PLoS ONE, vol. 12, 2017.
Shanak, S., O. Ulucan, and V. Helms, "Methylation-targeted specificity of the DNA binding proteins R.DpnI and MeCP2 studied by molecular dynamics simulations", Journal of Molecular Modeling, vol. 23, pp. 152, 2017.
Han, J., K. Pluhackova, and R. A. Böckmann, "The Multifaceted Role of SNARE Proteins in Membrane Fusion", Frontiers in Physiology, vol. 8, pp. 5, 2017.
Rehage, M., J. Delius, T. Hofmann, and M. Hannig, "Oral astringent stimuli alter the enamel pellicle's ultrastructure as revealed by electron microscopy", Journal of Dentistry, vol. 63, 06/2017.
Hähl, H., J. Nabor Vargas, A. Griffo, P. Laaksonen, G. Szilvay, M. Lienemann, K. Jacobs, R. Seemann, and J-B. Fleury, "Pure Protein Bilayers and Vesicles from Native Fungal Hydrophobins", Advanced Materials, vol. 29, pp. 1602888, 2017.
Sadegh, S.., M.. Nazarieh, C.. Spaniol, and V.. Helms, "Randomization Strategies Affect Motif Significance Analysis in TF-miRNA-Gene Regulatory Networks", J. Integr. Bioinform, vol. 14 (2), 2017.
Will, T., and V. Helms, "Rewiring of the inferred protein interactome during blood development studied with the tool PPICompare", BMC Systems Biology, vol. 11, pp. 44, 2017.
2016
Fritzsche, M., C. Erlenkämper, E. Moeendarbary, G. Charras, and K. Kruse, "Actin kinetics shapes cortical network structure and mechanics", Science Advances, vol. 2, pp. e1501337, 2016.
Johann, D., D. Goswami, and K. Kruse, "Assembly of bipolar microtubule structures by passive cross-linkers and molecular motors", Phys. Rev. E, vol. 93, pp. 062415, 2016.
Bogeski, I., and A.M. Van Hook, "Calcium signaling and ROS in monocytes", Science Signaling, vol. 9, issue 418, 03/2016.
Saul, S., C. S. Gibhardt, B. Schmidt, A. Lis, B. Pasieka, D. Conrad, P. Jung, R. Gaupp, B. Wonnenberg, E. Diler, et al., "A calcium-redox feedback loop controls human monocyte immune responses: The role of ORAI Ca2+ channels", Science Signaling, vol. 9, pp. ra26–ra26, 2016.
Becker, B., M. R. Shaebani, D. Rammo, T. Bubel, L. Santen, and M. J. Schmitt, "Cargo binding promotes KDEL receptor clustering at the mammalian cell surface", Scientific Reports, vol. 6, pp. 28940, 2016.
Kruse, K., "Cell Crawling Driven by Spontaneous Actin Polymerization Waves", Physical Models of Cell Motility: Springer International Publishing, 2016.
Niemeyer, B. A., "Changing calcium: CRAC channel (STIM and Orai) expression, splicing, and posttranslational modifiers", Am. J. Physiol. Cell Physiol., vol. 310, pp. C701-C709, 2016.
Welter, M., T. Fredrich, H. Rinneberg, and H. Rieger, "Computational Model for Tumor Oxygenation Applied to Clinical Data on Breast Tumor Hemoglobin Concentrations Suggests Vascular Dilatation and Compression", PLoS ONE, vol. 11, pp. e0161267, 2016.
Welter, M., T. Fredrich, and H. Rieger, "Computer Simulations of the Tumor Vasculature: Applications to Interstitial Fluid Flow, Drug Delivery, and Oxygen Supply", Systems Biology of the Tumor Environment: Quantitative Modeling and Simulation, Heidelberg, New York, Springer, 2016.
Maccari, I., R. Zhao, M. Peglow, K. Schwarz, I. Hornak, M. Pasche, A. Quintana, M. Hoth, B. Qu, and H. Rieger, "Cytoskeleton rotation relocates mitochondria to the immunological synapse and increases calcium signals", Cell Calcium, vol. 60, issue 5, pp. 309 -321, 2016.
Guo, Y., E. Terazzi, R. Seemann, J. B. Fleury, and V. A. Baulin, "Direct proof of spontaneous translocation of lipid-covered hydrophobic nanoparticles through a phospholipid bilayer", Science Advances, vol. 2, pp. e1600261, 2016.
Hertel, S., L. Graffy, S. Pötschke, S. Basche, A. Al-Ahmad, W. Hoth-Hannig, M. Hannig, and C. Hannig, "Effect of Inula viscosa on the pellicle’s protective properties and initial bioadhesion in-situ", Archives of Oral Biology, vol. 71, pp. 87-96, 2016.
Spengler, C., N. Thewes, F. Nolle, T. Faidt, N. Umanskaya, M. Hannig, M. Bischoff, and K. Jacobs, "Enhanced Adhesion of S. Mutans to Hydroxyapatite after Inoculation in Saliva", arXiv:1609.01137, 2016.
Tierno, P., and M. R. Shaebani, "Enhanced diffusion and anomalous transport of magnetic colloids driven above a two-state flashing potential", Soft Matter, vol. 12, 2016.
Haeri, H. H., I. Bogeski, R. Gulaboski, V. Mirčeski, M. Hoth, and R. Kappl, "An EPR and DFT study on the primary radical formed in hydroxylation reactions of 2,6-dimethoxy-1,4-benzoquinone", Molecular Physics, vol. 114, issue 12, pp. 1856-1866, 06/2016.
Hähl, H., J. Nabor Vargas, A. Griffo, P. Laaksonen, G. Szilvay, M. Lienemann, K. Jacobs, R. Seemann, and J-B. Fleury, "Functional lipid-free pure protein bilayers and vesicles from native fungal hydrophobins", Advanced Materials, vol. in press, 2016.
Becker, B., A. Blum, E. Gießelmann, J. Dausend, D. Rammo, N. C. Müller, E. Tschacksch, M. Steimer, J. Spindler, U. Becherer, et al., "H/KDEL receptors mediate host cell intoxication by a viral A/B toxin in yeast", Scientific Reports, vol. 6, pp. 31105, 2016.
Nazarieh, M., A. Wiese, T. Will, M. Hamed, and V. Helms, "Identification of Key Player Genes in Gene Regulatory Networks", BMC Systems Biology, vol. 10, 2016.
Gibhardt, C. S., K. Zimmermann, X. Zhang, VV. Belousov, and I. Bogeski, "Imaging calcium and redox signals using genetically encoded fluorescent indicators", Cell Calcium, 2016.
Kensche, A., S. Pötschke, C. Hannig, G. Richter, W. Hoth-Hannig, and M. Hannig, "Influence of Calcium Phosphate and Apatite Containing Products on Enamel Erosion", The Scientific World Journal, vol. 2016, pp. 7959273, 2016.
Bokkasam, H., and A. Ott, "Information limited oligonucleotide amplification assay for affinity based profiling", PloS ONE, vol. 11, pp. 0151072, 2016.
Tosatto, A., R. Sommaggio, C. Kummerow, R.B. Bentham, T. Blacker, T. Berecz, M. Duchen, A. Rosato, I. Bogeski, G. Szabadkai, et al., "The mitochondrial calcium uniporter regulates breast cancer progression via HIF-1α", EMBO Molecular Medicine, vol. 8, issue 5, pp. 569-585, 05/2016.
Gulaboski, R., I. Bogeski, P. Kokoskarova, H. H. Haeri, S. Mitrev, V. Markovski, V. Mirčeski, M. Hoth, and R. Kappl, "New insights into the chemistry of Coenzyme Q-0: A voltammetric and spectroscopic study", Bioelectrochemistry, vol. 111, pp. 100-108, 2016.
Schwarz, K., Y. Schröder, and H. Rieger, "Numerical analysis of homogeneous and inhomogeneous intermittent search strategies", Phys. Rev. E, vol. 94, pp. 042133, 2016.
Schwarz, K., Y. Schröder, B. Qu, M. Hoth, and H. Rieger, "Optimality of spatially inhomogeneous search strategies", Phys. Rev. Lett., vol. 117, pp. 068101, 2016.
Rieger, H., T. Fredrich, and M. Welter, "Physics of the tumor vasculature: Theory and experiment", The European Physical Journal Plus, vol. 131, pp. 1–24, 2016.
Will, T., and V. Helms, "PPIXpress: construction of condition-specific protein interaction networks based on transcript expression.", Bioinformatics, vol. 32, pp. 571-8, 2016.
Worst, E. G., M. P. Exner, A. De Simone, M. Schenkelberger, V. Noireaux, N. Budisa, and A. Ott, "Residue-specific Incorporation of Noncanonical Amino Acids into Model Proteins Using an Escherichia coli Cell-free Transcription-translation System", J. Vis. Exp., vol. 114, pp. e54273, 2016.
Hafner, A. E., L. Santen, H. Rieger, and M. R. Shaebani, "Run-and-pause dynamics of cytoskeletal motor proteins", Scientific Reports, vol. 6, pp. 37162, 2016.
Hafner, A. E., and H. Rieger, "Spatial Organization of the Cytoskeleton enhances Cargo Delivery to Specific Target Areas on the Plasma Membrane of Spherical Cells", Physical Biology, vol. 13, pp. 066003, 2016.
Wollrab, V., R. Thiagarajan, A. Wald, K. Kruse, and D. Riveline, "Still and rotating myosin clusters determine cytokinetic ring constriction", Nat Commun, vol. 7, pp. 11860, 2016.
Bhat, S. S., K. S. Friedmann, A. Knörck, C. Hoxha, P. Leidinger, C. Backes, E. Meese, A. Keller, J. Rettig, M. Hoth, et al., "Syntaxin 8 is required for efficient lytic granule trafficking in cytotoxic T lymphocytes", Biochim Biophys Acta , vol. 1863, pp. 1653-1664, 2016.
Zeitz, C., T. Faidt, S. Grandthyll, H. Hähl, N. Thewes, C. Spengler, J. Schmauch, M. Deckarm, C. Gachot, H. Natter, et al., "Synthesis of hydroxyapatite substrates: Bridging the gap between model surfaces and enamel", ACS Applied Materials & Interfaces, vol. in print, 2016.
Alansary, D., B. Schmidt, D. K, I. Bogeski, H. Rieger, K. A, and B. A. Niemeyer, "Thiol dependent intramolecular locking of Orai1 channels", Scientific Reports, vol. 6, pp. 33347, 2016.
M Shaebani, R., A. Pasula, A. Ott, and L. Santen, "Tracking of plus-ends reveals microtubule functional diversity in different cell types", Scientific Reports, vol. 6, pp. 30285, 2016.
Worst, E. G., P. Zimmer, E. Wollrab, K. Kruse, and A. Ott, "Unbounded growth patterns of reproducing, competing polymers – similarities to biological evolution", New Journal of Physics, vol. 18, pp. 103003, 2016.
Peckys, D. B., D. Alansary, B. A. Niemeyer, and N. de Jonge, "Visualizing Quantum Dot Labeled ORAI1 Proteins in Intact Cells Via Correlative Light and Electron Microscopy", Microscopy and Microanalysis, pp. 1-11, 2016.
Dhara, M., A. Yarzagaray, M. Makke, B. Schindeldecker, Y. Schwarz, A. Shaaban, S. Sharma, R. A. Böckmann, M. Lindau, R. Mohrmann, et al., "v-SNARE transmembrane domains function as catalysts for vesicle fusion", eLife, vol. 5, pp. e17571, 2016.
Becker, B., T. Schnöder, and M. J. Schmitt, "Yeast Reporter Assay to Identify Cellular Components of Ricin Toxin A Chain Trafficking", Toxins, vol. 8, pp. 366, 2016.
Fell, B., S. Eckrich, K. Blum, T. Eckrich, D. Hecker, G. J. Obermair, S. Münkner, V. Flockerzi, B. Schick, and J. Engel, "α2δ2 controls the function and trans-synaptic coupling of Cav1.3 channels in mouse inner hair cells and is essential for normal hearing", J. Neuroscience, vol. 36, pp. 11024-11036, 2016.
2015
Weber, M. - T., M. Hannig, S. Pötschke, F. Höhne, and C. Hannig, "Application of Plant Extracts for the Prevention of Dental Erosion: An in situ/in vitro Study", Caries Research, vol. 49, pp. 477–487, 2015.
Petrungaro, C., K. Zimmermann, V. Küttner, M. Fischer, J. Dengjel, I. Bogeski, and J. Riemer, "The Ca2+-Dependent Release of the Mia40-Induced MICU1-MICU2 Dimer from MCU Regulates Mitochondrial Ca2+ Uptake", Cell Metabolism, 2015.
Frischauf, I., V. Zayats, , I. Derler, I. Bogeski, C. Romanin, RH. Ettrich, and R. Schindl, "A calcium-accumulating region, CAR, in the channel Orai1 enhances Ca2+ permeation and SOCE-induced gene transcription.", Science Signaling, vol. 8, issue 408, 12/2015.
Worst, E. G., M. P. Exner, A. De Simone, M. Schenkelberger, V. Noireaux, N. Budisa, and A. Ott, "Cell-free expression with the toxic amino acid canavanine", Bioorganic & Medicinal Chemistry Letters, vol. 25, pp. 3658–3660, 2015.
Melnyk, A., H. Rieger, and R. Zimmermann, "Co-chaperones of the Mammalian Endoplasmic Reticulum", The Networking of Chaperones by Co-chaperones, vol. 78: Springer International Publishing, pp. 179-200, 2015.
Mohrmann, R., M. Dhara, and D. Bruns, "Complexins: small but capable", Cell Mol Life Sci., vol. 72, 2015.
Thewes, N., P. Loskill, C. Spengler, S. Hümbert, M. Bischoff, and K. Jacobs, "A detailed guideline for the fabrication of single bacterial probes used for atomic force spectroscopy", European Physical Journal E, vol. 38, pp. 140, 2015.
Holzmann, C., T. Kilch, S. Kappel, K.. Dorr, V. Jung, M. Stöckle, I. Bogeski, and C. Peinelt, "Differential Redox Regulation of Ca(2+) Signaling and Viability in Normal and Malignant Prostate Cells.", Biophysical Journal, vol. 109, issue 7, pp. 1410–1419, 10/2015.
Grychtol, S., G. Viergutz, S. Pötschke, W. H. Bowen, W. Hoth-Hannig, B. Leis, N. Umanskaya, M. Hannig, and C. Hannig, "Enzymes in the in-situ pellicle of children with different caries activity", European Journal of Oral Sciences, vol. 123, pp. 319–326, 2015.
Alansary, D., I. Bogeski, and B. A. Niemeyer, "Facilitation of Orai3 targeting and store-operated function by Orai1", Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, vol. 1853, pp. 1541-1550, 2015.
Johann, D., D. Goswami, and K. Kruse, "Generation of Stable Overlaps between Antiparallel Filaments", Phys. Rev. Lett., vol. 115, pp. 118103, 2015.
Law, J. Ka Yan, A. Susloparova, X. Thang Vu, X. Zhou, F. Hempel, B. Qu, M. Hoth, and S. Ingebrandt, "Human T cells monitored by impedance spectrometry using field-effect transistor arrays: A novel tool for single-cell adhesion and migration studies", Biosensors and Bioelectronics, vol. 67, pp. 170 - 176, 2015.
Kettner, M., A. Schmidt, M. Windgassen, P. Schmidt, C. Wagner, and F. Ramsthaler, "Impact height and wall distance in bloodstain pattern analysis—what patterns of round bloodstains can tell us", International Journal of Legal Medicine, vol. 129, pp. 133-140, 2015.
Delle, L. E., C. Huck, M. Bäcker, F. Müller, S. Grandthyll, K. Jacobs, R. Lilischkis, X. T. Vu, M. J. Schöning, P. Wagner, et al., "Impedimetric immunosensor for the detection of histamine based on reduced graphene oxide", physica status solidi (a), vol. 212, pp. 1327–1334, 2015.
Diler, E., S. Saul, I. Bogeski, C. Meier, and T. Tschernig, "Influence of extracellular magnesium on phagocytosis and free cytosolic Mg levels in differentiated U937 and MH-S cells.", Magnesium Research , vol. Volume 28, issue 1, pp. 23-31, 2015.
Rieger, H., and M. Welter, "Integrative models of vascular remodeling during tumor growth", Wiley Interdisciplinary Reviews: Systems Biology and Medicine, vol. 7, pp. 113–129, 2015.
Hamed, M., C. Spaniol, A. Zapp, and V. Helms, "Integrative network-based approach identifies key genetic elements in breast invasive carcinoma", BMC Genomics, vol. 16 (Suppl 5), pp. S2, 2015.
Appert-Rolland, C.., M.. Ebbinghaus, and L.. Santen, "Intracellular transport driven by cytoskeletal motors: General mechanisms and defects", Physics Reports, vol. 593, pp. 1-59, 2015.
Arita, C., A. Lück, and L. Santen, "Length regulation of microtubules by molecular motors: exact solution and density profiles", Journal of Statistical Mechanics: Theory and Experiment, vol. 2015, pp. P06027, 2015.
Grandthyll, S., K. Jacobs, and F. Müller, "Liquid-source growth of graphene on Ag(001)", physica status solidi (b), pp. n/a–n/a, 2015.
Cierlitza, M., H. Chauvistré, I. Bogeski, X. Zhang, A. Hauschild, M. Herlyn, D. Schadendorf, T. Vogt, and A. Roesch, "Mitochondrial oxidative stress as a novel therapeutic target to overcome intrinsic drug resistance in melanoma cell subpopulations", Experimental Dermatology, vol. 24, pp. 155-157, 2015.
Klein, S., C. Appert-Rolland, and L. Santen, "Motility states in bidirectional cargo transport", EPL (Europhysics Letters), vol. 111, pp. 68005, 2015.
Rosenkranz, A., L. Reinert, C. Gachot, H. Aboufadl, S. Grandthyll, K. Jacobs, F. Müller, and F. Mücklich, "Oxide Formation, Morphology, and Nanohardness of Laser-Patterned Steel Surfaces", Advanced Engineering Materials, pp. n/a–n/a, 2015.
Sadjadi, Z., R. M Shaebani, H. Rieger, and L. Santen, "Persistent-random-walk approach to anomalous transport of self-propelled particles", Physical Review E, vol. 91, pp. 062715, 2015.
Wittpahl, G., I. Kölling-Speer, S. Basche, E. Herrmann, M. Hannig, K. Speer, and C. Hannig, "The Polyphenolic Composition of Cistus incanus Herbal Tea and Its Antibacterial and Anti-adherent Activity against Streptococcus mutans", Planta Medica, vol. 81, pp. 1727-1735, 2015.
Bufe, B., T. Schumann, R. Kappl, I. Bogeski, C. Kummerow, M. Podgórska, S. Smola, M. Hoth, and F. Zufall, "Recognition of bacterial signal peptides by mammalian formyl peptide receptors: a new mechanism for sensing pathogens", The Journal of Biological Chemistry, vol. 290, pp. 7369-7387, 2015.
Suzuki, Y., and M. J. Schmitt, "Redox diversity in ERAD-mediated protein retrotranslocation from the endoplasmic reticulum: a complex puzzle", Biological Chemistry, vol. 396, pp. 539–554, 2015.
Simeoni, L., and I. Bogeski, "Redox regulation of T-cell receptor signaling", Biological Chemistry, vol. 396, issue 5, pp. 555-568, 05/2015.
Nickel, AG., A. von Hardenberg, M. Hohl, , I. Bogeski, S. Cortassa, R. Kappl, B. Pasieka, , L. Kästner, et al., "Reversal of Mitochondrial Transhydrogenase Causes Oxidative Stress in Heart Failure", Cell Metabolism, vol. 22, pp. 472-484, 2015.
Miederer, A-M., D. Alansary, G. Schwar, P-H. Lee, M. Jung, V. Helms, and B. A. Niemeyer, "A STIM2 splice variant negatively regulates store-operated calcium entry", Nature Communications, vol. 6, pp. 6899, 2015.
Thewes, N., A. Thewes, P. Loskill, H. Peisker, M. Bischoff, M. Herrmann, L. Santen, and K. Jacobs, "Stochastic binding of Staphylococcus aureus to hydrophobic surfaces", Soft Matter, vol. 11, pp. 8913-8919, 2015.
Chang, C-W., E. Hui, J. Bai, D. Bruns, E. R. Chapman, and M. B. Jackson, "A Structural Role for the Synaptobrevin 2 Transmembrane Domain in Dense-Core Vesicle Fusion Pores", J. Neurosci., vol. 35, pp. 5772-5780, 2015.
Han, J.., K.. Pluhackova, D.. Bruns, and RA.. Böckmann, "Synaptobrevin transmembrane domain determines the structure and dynamics of the SNARE motif and the linker region", BBA, vol. 1858, 2015.
Hamed, M., C. Spaniol, M. Nazarieh, and V. Helms, "TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks", Nucleic Acids Research, vol. 43, pp. W283-W288, 2015.
Flormann, D., E. Kuder, P. Lipp, C. Wagner, and L. Kaestner, "Is there a role of C-reactive protein in red blood cell aggregation?", International Journal of Laboratory Hematology, vol. 37, pp. 474–482, 2015.
Sander, M., J. Flesch, and A. Ott, "Using cell monolayer rheology to probe average single cell mechanical properties", Biorheology, vol. 12, 2015.
Bäumchen, O., H. Hähl, P. Loskill, and K. Jacobs, "Vom Photolack zum Gecko", Physik Journal, vol. 14 , pp. 37-43, 2015.
2014
M Shaebani, R., Z. Sadjadi, I. M. Sokolov, H. Rieger, and L. Santen, "Anomalous diffusion of self-propelled particles in directed random environments", Physical Review E, vol. 90, pp. 030701(R), 2014.
Herrmann, M., "Antimicrobial Effects Promoting Biofilm Formation and Persistent Disease: The Role of a DNA-Binding Regulator, SarA, in Staphylococcal Endocarditis", Journal of Infectious Diseases, vol. 209, pp. 1153-1155, 2014.
Peisker, H., L. Heepe, A. E. Kovalev, and S. N. Gorb, "Comparative study of the fluid viscosity in tarsal hairy attachment systems of flies and beetles", Journal of The Royal Society Interface, vol. 11, 2014.
Wolff, D., A. Kensche, S. Rupf, M. Hannig, and C. Hannig, "Der orale Biofilm – neue Perspektiven zu einem alten Thema?", Deutsche Zahnärztliche Zeitschrift, vol. 69, issue 11, pp. 658-673, 2014.
Wettmann, L., M. Bonny, and K. Kruse, "Effects of molecular noise on bistable protein distributions in rod-shaped bacteria", Interface Focus, vol. 4, pp. 20140039, 2014.
Klein, S., C. Appert-Rolland, and L. Santen, "Environmental control of microtubule-based bidirectional cargo transport", EPL (Europhysics Letters), vol. 107, pp. 18004, 2014.
Vargas, J. Nabor, R. Seemann, and J-B. Fleury, "Fast membrane hemifusion via dewetting between lipid bilayers", Soft Matter, vol. 10, pp. 9293-9299, 2014.
Klein, S.., C.. Appert-Rolland, and L.. Santen, "Fluctuation effects in bidirectional cargo transport", The European Physical Journal Special Topics, vol. 223, pp. 3215–3225, 2014.
Neef, M., and K. Kruse, "Generation of stationary and moving vortices in active polar fluids in the planar Taylor-Couette geometry", Phys. Rev. E, vol. 90, pp. 052703, 2014.
Müller, F., S. Grandthyll, S. Gsell, M. Weinl, M. Schreck, and K. Jacobs, "Graphene from Fingerprints: Exhausting the Performance of Liquid Precursor Deposition", Langmuir, vol. 30, pp. 6114-6119, 2014.
Saul, S., H. Stanisz, C. S. Backes, E. C. Schwarz, and M. Hoth, "How ORAI and TRP channels interfere with each other: Interaction models and examples from the immune system and the skin", European Journal of Pharmacology, vol. 739, pp. 49 - 59, 2014.
Shanak, S., and V. Helms, "Hydration properties of natural and synthetic DNA sequences with methylated adenine or cytosine bases in the R.DpnI target and BDNF promoter studied by molecular dynamics simulations", The Journal of Chemical Physics, vol. 141, pp. 22D512, 2014.
Thewes, N., P. Loskill, P. Jung, H. Peisker, M. Bischoff, M. Herrmann, and K. Jacobs, "Hydrophobic interaction governs unspecific adhesion of staphylococci: a single cell force spectroscopy study", Journal of Nanotechnology, vol. 5, pp. 1501–1512, 2014.
Will, T., and V. Helms, "Identifying transcription factor complexes and their roles", Bioinformatics, vol. 30, pp. i415-i421, 2014.
Stanisz, H., S. Saul, C. S. L. Müller, R. Kappl, B. A. Niemeyer, T. Vogt, M. Hoth, A. Roesch, and I. Bogeski, "Inverse regulation of melanoma growth and migration by Orai1/STIM2-dependent calcium entry", Pigment Cell & Melanoma Research, vol. 27, pp. 442–453, 2014.
Ballhausen, B., P. Jung, A. Kriegeskorte, P. Edward Makgotlho, U. Ruffing, L. von Müller, R. Köck, G. Peters, M. Herrmann, W. Ziebuhr, et al., "LA-MRSA CC398 differ from classical community acquired-MRSA and hospital acquired-MRSA lineages: Functional analysis of infection and colonization processes", International Journal of Medical Microbiology, vol. 304, pp. 777 - 786, 2014.
Alansary, D., T. Kilch, C. Holzmann, C. Peinelt, M. Hoth, and A. Lis, "Measuring Endogenous ICRAC and ORAI Currents with the Patch-Clamp Technique", Cold Spring Harbor Protocols, vol. 2014, pp. pdb.prot073254, 2014.
Alansary, D., T. Kilch, C. Holzmann, C. Peinelt, M. Hoth, and A. Lis, "The Minimal Requirements to Use Calcium Imaging to Analyze ICRAC", Cold Spring Harbor Protocols, vol. 2014, pp. pdb.prot073262, 2014.
Hannig, M., and C. Hannig, "Möglichkeiten und Grenzen der Schmelzregeneration – eine aktuelle Übersicht", Deutsche Zahnärztliche Zeitschrift, vol. 69, issue 3, pp. 131-142, 2014.
Alansary, D., T. Kilch, C. Holzmann, C. Peinelt, M. Hoth, and A. Lis, "Patch-Clamp Measurement of ICRAC and ORAI Channel Activity", Cold Spring Harbor Protocols, vol. 2014, pp. pdb.top066795, 2014.
Hannig, M., and C. Hannig, "The pellicle and erosion", Erosive tooth wear, no. 25, BAsel, Karger, pp. 206-214, 2014.
Brust, M., O. Aouane, M. Thiébaud, D. Flormann, C. Verdier, L. Kaestner, M.W. Laschke, H. Selmi, A. Benyoussef, T. Podgorski, et al., "The plasma protein fibrinogen stabilizes clusters of red blood cells in microcapillary flows", Scientific Reports, vol. 4, pp. 4348, 2014.
Ermakova, YG., DS. Bilan, ME. Matlashov, NM. Mishina, KN. Markvicheva, OM. Subach, FV. Subach, I. Bogeski, M. Hoth, G. Enikolopov, et al., "Red fluorescent genetically encoded indicator for intracellular hydrogen peroxide", Nature Communications, vol. Article number: 5222, 2014.
Bogeski, I., and B. A. Niemeyer, "Redox Regulation of Ion Channels", Antioxidants and Redox Signaling, vol. 21, pp. 859-862, 2014.
Loskill, P., P. M. Pereia, P. Jung, M. Bischoff, M. Herrmann, M. G. Pinho, and K. Jacobs, "Reduction of the Peptidoglycan Crosslinking Causes a Decrease in Stiffness of the Staphylococcus aureus Cell Envelope", Biophysical Journal, vol. 107, pp. 1082-1089, 2014.
Johann, D., D. Goswami, and K. Kruse, "Segregation of diffusible and directionally moving particles on a polar filament ", Phys. Rev. E, vol. 89, pp. 042713, 2014.
Kummerow, C., E. C. Schwarz, B. Bufe, F. Zufall, M. Hoth, and B. Qu, "A simple, economic, time-resolved killing assay", European Journal of Immunology, vol. 44, pp. 1870–1872, 2014.
Dreher, A., I. S. Aranson, and K. Kruse, "Spiral actin-polymerization waves can generate amoeboidal cell crawling", New Journal of Physics, vol. 16, pp. 055007, 2014.
Weber, J. P., T. L. Toft-Bertelsen, R. Mohrmann, I. Delgado-Martinez, and J. B. Sørensen, "Synaptotagmin-7 Is an Asynchronous Calcium Sensor for Synaptic Transmission in Neurons Expressing SNAP-23", PLoS ONE, vol. 9, pp. e114033, 2014.
Beznoussenko, G. V., S. Parashuraman, R. Rizzo, R. Polishchuk, O. Martella, D. Di Giandomenico, A. Fusella, A. Spaar, M. Sallese, M. Grazia Capestrano, et al., "Transport of soluble proteins through the Golgi occurs by diffusion via continuities across cisternae", eLife, vol. 3, pp. e02009, 2014.
Aouane, O., M. Thiébaud, A. Benyoussef, C. Wagner, and C. Misbah, "Vesicle dynamics in a confined Poiseuille flow: From steady-state to chaos", Physical Review E, vol. 90, pp. 033011, 2014.
2013
Wagner, C.., P.. Steffen, and S.. Svetina, "Aggregation of Red Blood Cells: From Rouleaux to Clot Formation", Comptes Rendues en Physique, vol. 14, pp. 459, 2013.
Schwarz, E.. C., B. Qu, and M. Hoth, "Calcium, cancer and killing: The role of calcium in killing cancer cells by cytotoxic T lymphocytes and natural killer cells", BBA Molecular Cell Research, vol. 1833, issue 7, pp. 1603-1611, 2013.
Schwarz, K., and H. Rieger, "Efficient kinetic Monte Carlo method for reaction–diffusion problems with spatially varying annihilation rates", J. Comp. Phys., vol. 237, pp. 396 - 410, 2013.
Gulaboski, R., I. Bogeski, V. Mirceski, S. Saul, B. Pasieka, H.H.. Haeri, M. Stefova, J.P.. Stanoeva, S. Mitrev, M. Hoth, et al., "Hydroxylated derivatives of dimethoxy-1,4-benzoquinone as redox switchable earth-alkaline metal ligands and radical scavengers", Scientific Reports, vol. 3, 2013.
Holzmann, C., T. Kilch, S. Kappel, A. Armbrüster, V. Jung, M. Stöckle, I. Bogeski, EC. Schwarz, and C. Peinelt, "ICRAC controls the rapid androgen response in human primary prostate epithelial cells and is altered in prostate cancer", Oncotarget, vol. 4, 2013.
Müller, F., M. Lessel, S. Grandthyll, K. Jacobs, S. Hüfner, S. Gsell, M. Weinl, and M. Schreck, "Increasing the Wear Resistance by Interstitial Alloying with Boron via Chemical Vapor Deposition", Langmuir, vol. 29, pp. 4543-4550, 2013.
Peglow, M., B. A. Niemeyer, M. Hoth, and H. Rieger, "Interplay of channels, pumps and organelle location in calcium microdomain formation", New Journal of Physics, vol. 15, no. 5, pp. 055022, 2013.
Welter, M., and H. Rieger, "Interstitial Fluid Flow and Drug Delivery in Vascularized Tumors: A Computational Model", PLoS ONE, vol. 8, pp. e70395, 2013.
Bonny, M., E. Fischer-Friedrich, M. Loose, P. Schwille, and K. Kruse, "Membrane Binding of MinE Allows for a Comprehensive Description of Min-Protein Pattern Formation.", PLOS Comput. Biol., vol. 9, pp. e1003347, 2013.
Müller, F., and S. Grandthyll, "Monolayer formation of hexagonal boron nitride on Ag(001)", Surface Science, vol. 617, pp. 207 - 210, 2013.
Kilch, T., D. Alansary, M. Peglow, K. Dorr, G. Rychkov, H. Rieger, C. Peinelt, and B. A. Niemeyer, "Mutations of the Ca2+-sensing Stromal Interaction Molecule STIM1 Regulate Ca2+ Influx by Altered Oligomerization of STIM1 and by Destabilization of the Ca2+ Channel Orai1", J. Biol. Chem., vol. 288, no. 3, pp. 1653–1664, Jan, 2013.
Hoth, M., and B. A. Niemeyer, "The neglected CRAC proteins: Orai2, Orai3 and STIM2", Current Topics in Membranes, vol. 71, pp. 237-271, 2013.
Roesch, A.., A.. Vultur, I.. Bogeski, and et. al., "Overcoming Intrinsic Multidrug Resistance in Melanoma by Blocking the Mitochondrial Respiratory Chain of Slow-Cycling JARID1Bhigh Cells", Cancer Cell, vol. 23, pp. 811-825, 2013.
Yao, W., X. Cai, C. Liu, Y. Qin, H. Cheng, S. Ji, W. Xu, C. Wu, T. Chen, J. Xu, et al., "Profilin 1 potentiates apoptosis induced by staurosporine in cancer cells", Curr. Mol. Med., vol. 13, pp. 417-28, 2013.
Steffen, P.., C.. Verdier, and C. Wagner, "Quantification of Depletion-Induced Adhesion of Red Blood Cells", Phys. Rev. Lett., vol. 110: American Physical Society, pp. 018102, 2013.
Minetti, G.., S.. Egeé, D.. Mörsdorf, P.. Steffen, A.. Makhro, C.. Achilli, A.. Ciana, J.. Wang, G.. Bouyer, I.. Bernhardt, et al., "Red cell investigations: Art and artefacts", Blood Reviews, vol. 27, pp. 91–101, 2013.
Loskill, P., C. Zeitz, S. Grandthyll, N. Thewes, F. Müller, M. Bischoff, M. Herrmann, and K. Jacobs, "Reduced Adhesion of Oral Bacteria on Hydroxyapatite by Fluoride Treatment", Langmuir, vol. 29, no. 18, pp. 5528-5533, 2013.
Brust, M.., C.. Schaefer, R.. Doerr, L.. Pan, M.. Garcia, P.. E. Arratia, and C.. Wagner, "Rheology of Human Blood Plasma: Viscoelastic Versus Newtonian Behavior", Phys. Rev. Lett., vol. 110, pp. 078305 , 2013.
Mirceski, V., R. Gulaboski, M. Lovric, I. Bogeski, R. Kappl, and M. Hoth, "Square-Wave Voltammetry: A Review on the Recent Progress.", Electroanalysis, 2013.
Thutupalli, S., J-B. Fleury, A. Steinberger, S. Herminghaus, and R. Seemann, "Why can artificial membranes be fabricated so rapidly in microfluidics?", Chem. Commun., vol. 49: The Royal Society of Chemistry, pp. 1443-1445, 2013.