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Collaborative Research Center CRC / SFB 1027 |
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, "CD16+ as predictive marker for early relapse in aggressive B-NHL/DLBCL patients", Molecular Cancer, vol. 23, pp. 210, 2024.
, "Collective chemotactic search strategies", arXiv, 2024.
, "Dynamic Second Harmonic Imaging of Proton Translocation Through Water Needles in Lipid Membranes", Journal of the American Chemical Society, vol. 146, pp. 19818–19827, 2024.
, "Dynamic Second Harmonic Imaging of Proton Translocation Through Water Needles in Lipid Membranes", Journal of the American Chemical Society, vol. 146, pp. 19818–19827, 2024.
, "Effect of Polyphenols on the Ultrastructure of the Dentin Pellicle and Subsequent Erosion", Caries Res, vol. 58, pp. 81–89, 2024.
, "Emergent complex phases in a discrete flocking model with reciprocal and non-reciprocal interactions", arxiv, 2024.
, "Endoplasmic Reticulum Membrane Homeostasis and the Unfolded Protein Response", Cold Spring Harbor Laboratory Library, pp. a041400, 2024.
, "How to steer active colloids up a vertical wall", Nature Communications, vol. 15, pp. 1710, 2024.
, "Melanocyte differentiation and mechanosensation are differentially modulated by distinct extracellular matrix proteins", bioRxiv, 2024.
, "Melanocyte differentiation and mechanosensation are differentially modulated by distinct extracellular matrix proteins", bioRxiv, 2024.
, "MemPrep, a new technology for isolating organellar membranes provides fingerprints of lipid bilayer stress", The EMBO Journal, vol. 43, pp. 1653-1685, 2024.
, "Multiple clustered centrosomes in antigen-presenting cells foster T cell activation without MTOC polarization", bioRxiv, 2024.
, "Optimal number of agents in a collective search, and when to launch them", arxiv, 2024.
, "Stationary particle currents in sedimenting active matter wetting a wall", Phys. Rev. E, vol. 109, pp. 014616, Jan, 2024.
, "The structure and mechanics of the cell cortex depend on the location and adhesion state", Proceedings of the National Academy of Sciences, vol. 121, pp. e2320372121, 2024.
, "The structure and mechanics of the cell cortex depend on the location and adhesion state", Proceedings of the National Academy of Sciences, vol. 121, pp. e2320372121, 2024.
, "Topotaxis of Active Particles Induced by Spatially Heterogeneous Sliding along Obstacles", Phys. Rev. Research, vol. 6, pp. 013178, 2024.
, "Alignment interaction and band formation in assemblies of auto-chemorepulsive walkers", Phys. Rev. E, vol. 108, pp. 034604, 2023.
, "A distinct pattern of growth and RAC1 signaling in melanoma brain metastasis cells", Neuro-Oncology, vol. 25, pp. 674-686, 09, 2023.
, "Engineered living materials for the conversion of a low-cost food-grade precursor to a high-value flavonoid", Frontiers in Bioengineering and Biotechnology, vol. 11, 2023.
, "Flocking of two unfriendly species: The two-species Vicsek model", Phys. Rev. E, vol. 107, pp. 024607, 2023.
, "IL-3 receptor signalling suppresses chronic intestinal inflammation by controlling mechanobiology and tissue egress of regulatory T cells", Gut, vol. 72, pp. 2081, 2023.
, "Jamming and flocking in the restricted active Potts model", Phys. Rev. E, vol. 108, pp. 014604, 2023.
, "Membrane homeostasis beyond fluidity: control of membrane compressibility", Trends Biochem Sci., vol. 48, issue 11, pp. 963-977, 2023.
, "Passive transport of Ca2+ ions through lipid bilayers imaged by widefield second harmonic microscopy", Biophysical Journal, vol. 122, pp. 624-631, 2023.
, "Passive transport of Ca2+ ions through lipid bilayers imaged by widefield second harmonic microscopy", Biophysical Journal, vol. 122, pp. 624-631, 2023.
, "Passive transport of Ca2+ ions through lipid bilayers imaged by widefield second harmonic microscopy", Biophysical Journal, vol. 122, pp. 624-631, 2023.
, "Amoeboid Cell Migration through Regular Arrays of Micropillars under Confinement", Biophysical Journal, 2022.
, "Cytotoxic Efficiency of Human CD8+ T Cell Memory Subtypes", Frontiers in Immunology, vol. 13, 2022.
, "Extracellular vimentin is expressed at the rear of activated macrophage-like cells: Potential role in enhancement of migration and phagocytosis", Front. Cell Dev. Biol., vol. 10, pp. 891281, 2022.
, "Faster cytotoxicity with age: Increased perforin and granzyme levels in cytotoxic CD8+ T cells boost cancer cell elimination", Aging Cell, vol. 21, pp. e13668, 2022.
, "Interacting particles in an activity landscape", New Journal of Physics, vol. 24, pp. 093013, sep, 2022.
, "Ion-Induced Transient Potential Fluctuations Facilitate Pore Formation and Cation Transport through Lipid Membranes", Journal of the American Chemical Society, vol. 144, pp. 23352, 12, 2022.
, "Ion-Induced Transient Potential Fluctuations Facilitate Pore Formation and Cation Transport through Lipid Membranes", Journal of the American Chemical Society, vol. 144, pp. 23352, 12, 2022.
, "Kinematics of persistent random walkers with two distinct modes of motion", Phys. Rev. E, vol. 106, pp. 034105, Sep, 2022.
, "PEX19 Coordinates Neutral Lipid Storage in Cells in a Peroxisome-Independent Fashion", Front. Cell Dev. Biol, vol. 10, pp. 859052, 2022.
, "Polar flocks with discretized directions: The active clock model approaching the Vicsek model", Europhysics Letters, vol. 138, pp. 41001, 2022.
, "Stochastic model of T cell repolarization during target elimination (II)", Biophysical Journal, vol. 121, pp. 1246-1265, 2022.
, "Unspecific CTL Killing Is Enhanced by High Glucose via TNF-Related Apoptosis-Inducing Ligand", Frontiers in Immunology, vol. 13, pp. 831680, 2022.
, "The dentin pellicle – a neglected topic in dental research", Arch Oral Biol , vol. 129, pp. 105212, 2021.
, "Effects of Octenidine on the Formation and Disruption of Dental Biofilms: An Exploratory In Situ Study in Health Subjects.", J Dent Res , vol. 100(9) , pp. 950-959, 2021.
, "Engineered living biomaterials", Nature Reviews Materials, vol. 6, pp. 1175, 2021.
, "First insights into chlorhexidine retention in the oral cavity after application of different regimens", Clin Oral Invest, vol. 25, pp. 6105-6118, 2021.
, "Full incorporation of the noncanonical amino acid hydroxylysine as a surrogate for lysine in green fluorescent protein", Bioorganic & Medicinal Chemistry, vol. 41, pp. 116207, 2021.
, "High Glucose Enhances Cytotoxic T Lymphocyte-Mediated Cytotoxicity", Frontiers in Immunology, vol. 12, pp. 689337, 2021.
, "Loss of Mitochondrial Ca2+ Uniporter Limits Inotropic Reserve and Provides Trigger and Substrate for Arrhythmias in Barth Syndrome Cardiomyopathy", Circulation, vol. 144, pp. 1694-1713, 2021.
, "Loss of Mitochondrial Ca2+ Uniporter Limits Inotropic Reserve and Provides Trigger and Substrate for Arrhythmias in Barth Syndrome Cardiomyopathy", Circulation, vol. 144, pp. 1694-1713, 2021.
, "Narrow escape problem in two-shell spherical domains", Phys. Rev. E, vol. 104, pp. 044124, 2021.
, "Nascent fusion pore opening monitored at single-SNAREpin resolution", PNAS, vol. 118, pp. e2024922118, 2021.
, "Optimal Non-Markovian Search Strategies with n-Step Memory", Phys. Rev. Lett., vol. 127, pp. 070601, 2021.
, "Oscillatory Microrheology, Creep Compliance and Stress Relaxation of Biological Cells Reveal Strong Correlations as Probed by Atomic Force Microscopy ", Frontiers in physics, vol. 9, issue 472, 2021.
, "Profiling of cytokines, chemokines and growth factors in saliva and gingival crevicular fluid", Cytokine, vol. 142, pp. 155504, 2021.
, "A short isoform of STIM1 conveys a frequency dependent form of synaptic enhancement", Cell Reports, vol. 34, pp. 108844, 2021.
, "Apolipoprotein C3 induces inflammation and organ damage by alternative inflammasome activation", Nature Immunology, vol. 21, pp. 30–41, 2020.
, "Apolipoprotein C3 induces inflammation and organ damage by alternative inflammasome activation", Nature Immunology, vol. 21, pp. 30–41, 2020.
, "Capillary Action in Scalar Active Matter", Phys. Rev. Lett., vol. 124, pp. 048001, Jan, 2020.
, "Chlorhexidine rinsing inhibits biofilm formation and causes biofilm disruption on dental enamel in situ", Clin Oral Invest, vol. 24, pp. 3843-3853, 2020.
, "Computational models for active matter", Nature Reviews Physics, vol. 2, pp. 181–199, 2020.
, "Cooperative Effects of an Antifungal Moiety and DMSO on Pore Formation over Lipid Membranes Revealed by Free Energy Calculations", The Journal of Physical Chemistry B, vol. 124, pp. 8811, 2020.
, "Determination of chlorhexidine in different oral sites using matrix-assisted laser desorption/ionization-time of flight mass spectrometry", Arch Oral Biol , vol. 110, pp. 104623, 2020.
, "Flocking and reorientation transition in the 4-state active Potts model", Europhysics Letters, vol. 130, pp. 66001, 2020.
, "Integration of the B-Cell Receptor Antigen Neurabin-I/SAMD14 Into an Antibody Format as New Therapeutic Approach for the Treatment of Primary CNS Lymphoma", Frontiers in Oncology, vol. 10, pp. 2467, 2020.
, "Interorganelle Tethering to Endocytic Organelles Determines Directional Cytokine Transport in CD4+ T Cells", The Journal of Immunology, vol. 205, pp. 2988–3000, 2020.
, "Kinesin-14 motors drive a right-handed helical motion of antiparallel microtubules around each other", Nature Communications, vol. 11, pp. 2565, 2020.
, "Kinesin-14 motors drive a right-handed helical motion of antiparallel microtubules around each other", Nature Communications, vol. 11, pp. 2565, 2020.
, "Migration of Cytotoxic T Lymphocytes in 3D Collagen Matrices", Biophysical Journal, vol. 119, pp. 2141-2152, 2020.
, "Oxidative Stress-Induced STIM2 Cysteine Modifications Suppress Store-Operated Calcium Entry", Cell Rep., vol. 33, pp. 108292, 2020.
, "Oxygen in the Tumor Microenvironment: Mathematical and Numerical Modeling", Tumor Microenvironment: Molecular Players – Part A, Cham, Springer International Publishing, pp. 53–76, 2020.
, "Binding Forces of Cellulose Binding Modules on Cellulosic Nanomaterials", Biomacromolecules , vol. 20, pp. 769, 2019.
, "The Calmodulin Binding Region of the Synaptic Vesicle Protein Mover Is Required for Homomeric Interaction and Presynaptic Targeting.", Front Mol Neurosci., vol. 12, pp. 249, 2019.
, "The Calmodulin Binding Region of the Synaptic Vesicle Protein Mover Is Required for Homomeric Interaction and Presynaptic Targeting.", Front Mol Neurosci., vol. 12, pp. 249, 2019.
, "Dynamic vessel adaptation in synthetic arteriovenous networks", Journal of Theoretical Biology, vol. 483, pp. 109989, 2019.
, "Fine-grained simulations of the microenvironment of vascularized tumours", Scientific Reports, vol. 9, pp. 11698, 2019.
, "Highly Reproducible Physiological Asymmetric Membrane with Freely Diffusing Embedded Proteins in a 3D‐Printed Microfluidic Setup", Small, vol. 15, issue 21, pp. 1900725, 2019.
, "Highly Reproducible Physiological Asymmetric Membrane with Freely Diffusing Embedded Proteins in a 3D‐Printed Microfluidic Setup", Small, vol. 15, issue 21, pp. 1900725, 2019.
, "Impact of oral astringent stimuli on surface charge and morphology of the protein-rich pellicle at the tooth–saliva interphase.", Colloids Surfaces B, vol. 174, pp. 451-458, 02/2019.
, "The narrow escape problem in a cirrcular domain with radially varying diffusivity", J. Phys. A, vol. 52, pp. 424002, 2019.
, "Proteomic analysis of the initial oral pellicle in caries-active and caries-free individuals", Proteom Clin Appl, vol. 13, pp. 1800143, 2019.
, "Reaction-diffusion model for STIM-ORAI interaction: The role of ROS and mutations", Journal of Theoretical Biology, vol. 470, pp. 64 - 75, 2019.
, "Redox signals at the ER-mitochondria interface control melanoma Progression", EMBO Journal, vol. 38, pp. e100871, 2019.
, "Search and Capture Efficiency of Dynamic Microtubules for Centrosome Relocation during IS Formation", Biophysical Journal, vol. 116, pp. 2079 - 2091, 2019.
, "STIM-Orai Channels and Reactive Oxygen Species in the Tumor Microenvironment", Cancers, vol. 11, pp. 457, 2019.
, "Topology consistency of disease specific differential co-regulatory networks", BMC Bioinformatics, vol. 36, pp. 2300, 2019.
, "Transient Anomalous Diffusion in Run-and-Tumble Dynamics", Frontiers in Physics, vol. 7, pp. 120, 2019.
, "Active bundles of polar and bipolar filaments.", Phys. Rev. E, vol. Vol. 98, pp. 012413, 2018.
, "AXER is an ATP/ADP exchanger in the membrane of the endoplasmic reticulum", Nature Communications, vol. 9, pp. 3489, 2018.
, "Biophysics of Killing", in: Physics of Life - Lecture Notes of the 49th IFF Spring School 2018, G. Gompper, J. Dhont, J. Elgeti, C. Fahlke, D. Fedosov, S. Förster, P. Lettinga, and A. Offenhäusser (eds): FZ Jülich, 2018.
, "Spatial cytoskeleton organization supports targeted intracellular transport", Biophys. J., vol. 114, pp. 13, 2018.
, "Synaptic coupling of inner ear sensory cells is controlled by brevican-based extracellular matrix baskets resembling perineuronal nets", BMC Biol., vol. 16, 2018.
, "Tumorcode - A framework to simulate vascularized tumors", The European Physical Journal E, vol. 41, pp. 55, 2018.
, "Bystander cells enhance NK cytotoxic efficiency by reducing search time", Scientific Reports, vol. 7, pp. 44357, 2017.
, "Enzymology and ultrastructure of the in situ pellicle in caries-active and caries-inactive patients", Caries Res., vol. 51, pp. 109-118, 2017.
, "H2O2 dynamics in the malaria parasite Plasmodium falciparum.", PLOS One, 04/2017.
, "H2O2 dynamics in the malaria parasite Plasmodium falciparum.", PLOS One, 04/2017.
, "Low STAT3 expression sensitizes to toxic effects of β-adrenergic receptor stimulation in peripartum cardiomyopathy", European Heart Journal, vol. 38, pp. 349-361, 2017.
, "Low STAT3 expression sensitizes to toxic effects of β-adrenergic receptor stimulation in peripartum cardiomyopathy", European Heart Journal, vol. 38, pp. 349-361, 2017.
, "Oral astringent stimuli alter the enamel pellicle's ultrastructure as revealed by electron microscopy", Journal of Dentistry, vol. 63, 06/2017.
, "Photoactivatable Mussel-Based Underwater Adhesive Proteins by an Expanded Genetic Code", ChemBioChem, vol. 18, pp. 1819-1823, 2017.
, "Transmembrane helix connectivity in Orai1 controls two gates for calcium-dependent transcription", Science Signaling, vol. 10, 11/2017.
, "Transmembrane helix connectivity in Orai1 controls two gates for calcium-dependent transcription", Science Signaling, vol. 10, 11/2017.
, "A calcium-redox feedback loop controls human monocyte immune responses: The role of ORAI Ca2+ channels", Science Signaling, vol. 9, pp. ra26–ra26, 2016.
, "Cargo binding promotes KDEL receptor clustering at the mammalian cell surface", Scientific Reports, vol. 6, pp. 28940, 2016.
, "Computational Model for Tumor Oxygenation Applied to Clinical Data on Breast Tumor Hemoglobin Concentrations Suggests Vascular Dilatation and Compression", PLoS ONE, vol. 11, pp. e0161267, 2016.
, "Computational Model for Tumor Oxygenation Applied to Clinical Data on Breast Tumor Hemoglobin Concentrations Suggests Vascular Dilatation and Compression", PLoS ONE, vol. 11, pp. e0161267, 2016.
, "Computer Simulations of the Tumor Vasculature: Applications to Interstitial Fluid Flow, Drug Delivery, and Oxygen Supply", Systems Biology of the Tumor Environment: Quantitative Modeling and Simulation, Heidelberg, New York, Springer, 2016.
, "Computer Simulations of the Tumor Vasculature: Applications to Interstitial Fluid Flow, Drug Delivery, and Oxygen Supply.", Systems Biology of Tumor Microenvironment. Advances in Experimental Medicine and Biology, Cham, Springer, pp. 31-72, 2016.
, "Cytoskeleton rotation relocates mitochondria to the immunological synapse and increases calcium signals", Cell Calcium, vol. 60, issue 5, pp. 309 -321, 2016.
, "H/KDEL receptors mediate host cell intoxication by a viral A/B toxin in yeast", Scientific Reports, vol. 6, pp. 31105, 2016.
, "H/KDEL receptors mediate host cell intoxication by a viral A/B toxin in yeast", Scientific Reports, vol. 6, pp. 31105, 2016.
, "Influence of Calcium Phosphate and Apatite Containing Products on Enamel Erosion", The Scientific World Journal, vol. 2016, pp. 7959273, 2016.
, "Intracellular Delivery of Poorly Soluble Polyphenols: Elucidating the Interplay of Self-Assembling Nanocarriers and Human Chondrocytes", Analytical Chemistry, vol. 88, 2016.
, "The mitochondrial calcium uniporter regulates breast cancer progression via HIF-1α", EMBO Molecular Medicine, vol. 8, issue 5, pp. 569-585, 05/2016.
, "The mitochondrial calcium uniporter regulates breast cancer progression via HIF-1α", EMBO Molecular Medicine, vol. 8, issue 5, pp. 569-585, 05/2016.
, "Numerical analysis of homogeneous and inhomogeneous intermittent search strategies", Phys. Rev. E, vol. 94, pp. 042133, 2016.
, "Optimality of spatially inhomogeneous search strategies", Phys. Rev. Lett., vol. 117, pp. 068101, 2016.
, "Physics of the tumor vasculature: Theory and experiment", The European Physical Journal Plus, vol. 131, pp. 1–24, 2016.
, "Run-and-pause dynamics of cytoskeletal motor proteins", Scientific Reports, vol. 6, pp. 37162, 2016.
, "Spatial Organization of the Cytoskeleton enhances Cargo Delivery to Specific Target Areas on the Plasma Membrane of Spherical Cells", Physical Biology, vol. 13, pp. 066003, 2016.
, "Still and rotating myosin clusters determine cytokinetic ring constriction", Nat Commun, vol. 7, pp. 11860, 2016.
, "Syntaxin 8 is required for efficient lytic granule trafficking in cytotoxic T lymphocytes", Biochim Biophys Acta , vol. 1863, pp. 1653-1664, 2016.
, "Thiol dependent intramolecular locking of Orai1 channels", Scientific Reports, vol. 6, pp. 33347, 2016.
, "The Ca2+-Dependent Release of the Mia40-Induced MICU1-MICU2 Dimer from MCU Regulates Mitochondrial Ca2+ Uptake", Cell Metabolism, 2015.
, "A calcium-accumulating region, CAR, in the channel Orai1 enhances Ca2+ permeation and SOCE-induced gene transcription.", Science Signaling, vol. 8, issue 408, 12/2015.
, "Co-chaperones of the Mammalian Endoplasmic Reticulum", The Networking of Chaperones by Co-chaperones, vol. 78: Springer International Publishing, pp. 179-200, 2015.
, "Impact height and wall distance in bloodstain pattern analysis—what patterns of round bloodstains can tell us", International Journal of Legal Medicine, vol. 129, pp. 133-140, 2015.
, "Integrative models of vascular remodeling during tumor growth", Wiley Interdisciplinary Reviews: Systems Biology and Medicine, vol. 7, pp. 113–129, 2015.
, "Mitochondrial oxidative stress as a novel therapeutic target to overcome intrinsic drug resistance in melanoma cell subpopulations", Experimental Dermatology, vol. 24, pp. 155-157, 2015.
, "Oxide Formation, Morphology, and Nanohardness of Laser-Patterned Steel Surfaces", Advanced Engineering Materials, pp. n/a–n/a, 2015.
, "Oxide Formation, Morphology, and Nanohardness of Laser-Patterned Steel Surfaces", Advanced Engineering Materials, pp. n/a–n/a, 2015.
, "Persistent-random-walk approach to anomalous transport of self-propelled particles", Physical Review E, vol. 91, pp. 062715, 2015.
, "Anomalous diffusion of self-propelled particles in directed random environments", Physical Review E, vol. 90, pp. 030701(R), 2014.
, "Der orale Biofilm – neue Perspektiven zu einem alten Thema?", Deutsche Zahnärztliche Zeitschrift, vol. 69, issue 11, pp. 658-673, 2014.
, "Inverse regulation of melanoma growth and migration by Orai1/STIM2-dependent calcium entry", Pigment Cell & Melanoma Research, vol. 27, pp. 442–453, 2014.
, "LA-MRSA CC398 differ from classical community acquired-MRSA and hospital acquired-MRSA lineages: Functional analysis of infection and colonization processes", International Journal of Medical Microbiology, vol. 304, pp. 777 - 786, 2014.
, "Transport of soluble proteins through the Golgi occurs by diffusion via continuities across cisternae", eLife, vol. 3, pp. e02009, 2014.
, "Transport of soluble proteins through the Golgi occurs by diffusion via continuities across cisternae", eLife, vol. 3, pp. e02009, 2014.
, "Efficient kinetic Monte Carlo method for reaction–diffusion problems with spatially varying annihilation rates", J. Comp. Phys., vol. 237, pp. 396 - 410, 2013.
, "Interplay of channels, pumps and organelle location in calcium microdomain formation", New Journal of Physics, vol. 15, no. 5, pp. 055022, 2013.
, "Interstitial Fluid Flow and Drug Delivery in Vascularized Tumors: A Computational Model", PLoS ONE, vol. 8, pp. e70395, 2013.
, "Mutations of the Ca2+-sensing Stromal Interaction Molecule STIM1 Regulate Ca2+ Influx by Altered Oligomerization of STIM1 and by Destabilization of the Ca2+ Channel Orai1", J. Biol. Chem., vol. 288, no. 3, pp. 1653–1664, Jan, 2013.
, "Mutations of the Ca2+-sensing Stromal Interaction Molecule STIM1 Regulate Ca2+ Influx by Altered Oligomerization of STIM1 and by Destabilization of the Ca2+ Channel Orai1", J. Biol. Chem., vol. 288, no. 3, pp. 1653–1664, Jan, 2013.
, "Overcoming Intrinsic Multidrug Resistance in Melanoma by Blocking the Mitochondrial Respiratory Chain of Slow-Cycling JARID1Bhigh Cells", Cancer Cell, vol. 23, pp. 811-825, 2013.