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2024
Zöphel, S., N. Küchler, J. Jansky, C. Hoxha, G. Schäfer, J. J. Weise, J. Vialle, L. Kaschek, G. Stopper, H. Eichler, et al., "CD16+ as predictive marker for early relapse in aggressive B-NHL/DLBCL patients", Molecular Cancer, vol. 23, pp. 210, 2024.
Zöphel, S., N. Küchler, J. Jansky, C. Hoxha, G. Schäfer, J. J. Weise, J. Vialle, L. Kaschek, G. Stopper, H. Eichler, et al., "CD16+ as predictive marker for early relapse in aggressive B-NHL/DLBCL patients", Molecular Cancer, vol. 23, pp. 210, 2024.
Gunaratnam, G., R. Leisering, B. Wieland, J. Dudek, N. Miosge, S. L. Becker, M. Bischoff, S. C. Dawson, M. Hannig, K. Jacobs, et al., "Characterization of a unique attachment organelle: Single-cell force spectroscopy of Giardia duodenalis trophozoites", Nanoscale, vol. 16, pp. 7145-7153, 2024.
Meyer, H., A. Wysocki, and H. Rieger, "Collective chemotactic search strategies", arXiv, 2024.
Klein, E. Marlen, H. Heintz, R. Wurst, S. Schuldt, H. Hähl, K. Jacobs, and J. Gescher, "Comparative analysis of the influence of BpfA and BpfG on biofilm development and current density in Shewanella oneidensis under oxic, fumarate- and anode-respiring conditions", Scientific Reports, vol. 14, pp. 23174, 2024.
Dhiman, R., R. S. Perera, C. S. Poojari, H. T. A. Wiedemann, R. Kappl, C. W. M. Kay, J. S. Hub, and B. Schrul, "Hairpin protein partitioning from the ER to lipid droplets involves major structural rearrangements", Nature Communications, vol. 15, pp. 4504, 2024.
Carreira, A. Fins, A. Wysocki, C. Ybert, M. Leocmach, H. Rieger, and C. Cottin-Bizonne, "How to steer active colloids up a vertical wall", Nature Communications, vol. 15, pp. 1710, 2024.
Stötzel, I., A-K. Weier, A. Sarkar, S. Som, P. Konopka, E. Miková, J. Böthling, M. Homrich, L. Schaedel, U. Kazmaier, et al., "Multiple clustered centrosomes in antigen-presenting cells foster T cell activation without MTOC polarization", bioRxiv, 2024.
Mangeat, M., S. Chakraborty, A. Wysocki, and H. Rieger, "Stationary particle currents in sedimenting active matter wetting a wall", Phys. Rev. E, vol. 109, pp. 014616, Jan, 2024.
2023
Dai, X., X. Zhou, R. Shao, R. Zhao, A. K. Yanamandra, Z. Xing, M. Ding, J. Wang, T. Liu, Q. Zheng, et al., "Bioactive Constituents of Verbena officinalis Alleviate Inflammation and Enhance Killing Efficiency of Natural Killer Cells", International Journal of Molecular Sciences, vol. 24, pp. 7144, 2023.
Dai, X., X. Zhou, R. Shao, R. Zhao, A. K. Yanamandra, Z. Xing, M. Ding, J. Wang, T. Liu, Q. Zheng, et al., "Bioactive Constituents of Verbena officinalis Alleviate Inflammation and Enhance Killing Efficiency of Natural Killer Cells", International Journal of Molecular Sciences, vol. 24, pp. 7144, 2023.
Dai, X., X. Zhou, R. Shao, R. Zhao, A. K. Yanamandra, Z. Xing, M. Ding, J. Wang, T. Liu, Q. Zheng, et al., "Bioactive Constituents of Verbena officinalis Alleviate Inflammation and Enhance Killing Efficiency of Natural Killer Cells", International Journal of Molecular Sciences, vol. 24, pp. 7144, 2023.
Stejerean-Todoran, I., P. A. Gimotty, A. Watters, P. Brafford, C. Krepler, T. Godok, H. Li, Zñe. Bonilla del Rio, A. Zieseniss, Dörthe. M. Katschinski, et al., "A distinct pattern of growth and RAC1 signaling in melanoma brain metastasis cells", Neuro-Oncology, vol. 25, pp. 674-686, 09, 2023.
Chatterjee, S., M. Mangeat, C-U. Woo, H. Rieger, and J. Dong Noh, "Flocking of two unfriendly species: The two-species Vicsek model", Phys. Rev. E, vol. 107, pp. 024607, 2023.
Ullrich, K. Anne- Marie, J. Derdau, C. Baltes, A. Battistella, G. Rosso, S. Uderhardt, L. Lou Schulze, L-J. Liu, M. Dedden, M. Spocinska, et al., "IL-3 receptor signalling suppresses chronic intestinal inflammation by controlling mechanobiology and tissue egress of regulatory T cells", Gut, vol. 72, pp. 2081, 2023.
Ullrich, K. Anne- Marie, J. Derdau, C. Baltes, A. Battistella, G. Rosso, S. Uderhardt, L. Lou Schulze, L-J. Liu, M. Dedden, M. Spocinska, et al., "IL-3 receptor signalling suppresses chronic intestinal inflammation by controlling mechanobiology and tissue egress of regulatory T cells", Gut, vol. 72, pp. 2081, 2023.
2020
Weinberg, F., M. K. L. Han, I. N. Dahmke, A. Del Campo, and N. de Jonge, "Anti-correlation of HER2 and focal adhesion complexes in the plasma membrane.", PLOS One, vol. 15, pp. e0234430, 2020.
Wysocki, A., and H. Rieger, "Capillary Action in Scalar Active Matter", Phys. Rev. Lett., vol. 124, pp. 048001, Jan, 2020.
Shaebani, M. R., A. Wysocki, R. G. Winkler, G. Gompper, and H. Rieger, "Computational models for active matter", Nature Reviews Physics, vol. 2, pp. 181–199, 2020.
Shaebani, M. R., A. Wysocki, R. G. Winkler, G. Gompper, and H. Rieger, "Computational models for active matter", Nature Reviews Physics, vol. 2, pp. 181–199, 2020.
Dahmke, I. Navina, P. Trampert, F. Weinberg, Z. Mostajeran, F. Lautenschläger, and N. de Jonge, "Correlative Fluorescence- and Electron Microscopy of Whole Breast Cancer Cells Reveals Different Distribution of ErbB2 Dependent on Underlying Actin", Frontiers in Cell and Developmental Biology, vol. 8, pp. 521, 2020.
Weinberg, F., D. B. Peckys, and N. de Jonge, "EGFR expression in HER2-driven breast cancer cells", Int. J. Mol. Sci. , vol. 21, pp. 9008, 2020.
Walter, C., R. Seemann, and J.-B. Fleury, "Flowing droplet interface bilayers: A microfluidic tool to control droplet trajectories and to study mechanical properties of unsupported lipid bilayers", Biomicrofluidics, vol. 14, pp. 044109, 2020.
Gunaratnam, G., C. Spengler, S. Trautmann, P. Jung, J. Mischo, B. Wieland, C. Metz, S. L. Becker, M. Hannig, K. Jacobs, et al., "Human blood plasma factors affect the adhesion kinetics of Staphylococcus aureus to central venous catheters", Sci Rep., vol. 10, pp. 20992, 2020.
Cordes, A., H. Witt, A. Gallemí-Pérez, B. Brückner, F. Grimm, M. Vache, T. Oswald, J. Bodenschatz, D. Flormann, F. Lautenschläger, et al., "Pre-stress and area-compressibility of actin cortices determine the viscoelastic response of living cells", Phys. Rev. Lett., vol. 125, pp. 068101, 2020.
Pak, V. V., D. Ezeriņa, O. G. Lyublinskaya, B. Pedre, P. A. Tyurin-Kuzmin, N. M. Mishina, M. Thauvin, D. Young, K. Wahni, S. A. Martín Gache, et al., "Ultrasensitive Genetically Encoded Indicator for Hydrogen Peroxide Identifies Roles for the Oxidant in Cell Migration and Mitochondrial Function", Cell Metab, vol. 31, pp. 642–653, 2020.
Guo, Y., M. Werner, J-B. Fleury, and V. A. Baulin, "Unexpected Cholesterol-Induced Destabilization of Lipid Membranes near Transmembrane Carbon Nanotubes", Phys. Rev. Lett., vol. 124, pp. 038001, 2020.
2019
Wasnik, V. H., P. Lipp, and K. Kruse, "Accuracy of position determination in Calcium signaling", Phys. Rev., vol. E 100, pp. 022401, 2019.
Akula, A. K., X. Zhang, J. S. Viotti, D. Nestvogel, J. S. Rhee, R. Ebrecht, K. Reim, F. Wouters, T. Liepold, O. Jahn, et al., "The Calmodulin Binding Region of the Synaptic Vesicle Protein Mover Is Required for Homomeric Interaction and Presynaptic Targeting.", Front Mol Neurosci., vol. 12, pp. 249, 2019.
Will, T., and V. Helms, "Differential analysis of combinatorial protein complexes with CompleXChange", BMC Bioinformatics, vol. 20, pp. 300, 2019.
Fredrich, T., M. Welter, and H. Rieger, "Dynamic vessel adaptation in synthetic arteriovenous networks", Journal of Theoretical Biology, vol. 483, pp. 109989, 2019.
Dias, A., M. Werner, K. R. Ward, J-B. Fleury, and V. A. Baulin, "High-Throughput 3D Visualization of Nanoparticles attached to the Surface of Red Blood Cells", Nanoscale, vol. 11, pp. 2282, 2019.
Dias, A., M. Werner, K. R. Ward, J-B. Fleury, and V. A. Baulin, "High-Throughput 3D Visualization of Nanoparticles attached to the Surface of Red Blood Cells", Nanoscale, vol. 11, pp. 2282, 2019.
Zimmermann, R., J. Delius, J. Friedrichs, S. Stehl, T. Hofmann, C. Hannig, M. Rehage, C. Werner, and M. Hannig, "Impact of oral astringent stimuli on surface charge and morphology of the protein-rich pellicle at the tooth–saliva interphase.", Colloids Surfaces B, vol. 174, pp. 451-458, 02/2019.
Sankaran, S., J. Becker, C. Wittmann, and A. del Campo, "Optoregulated Drug Release from an Engineered Living Material: Self‐Replenishing Drug Depots for Long‐Term, Light‐Regulated Delivery", Small, vol. 15, pp. 1804717, 2019.
Wasnik, V. H., P. Lipp, and K. Kruse, "Positional information readout in Calcium signaling", Phys. Rev. Lett., vol. 123, pp. 058102, 2019.
Gunaratnam, G., P. Jung, J. Willeit, C. Spengler, K. Jacobs, and M. Bischoff, "Probing the Adhesion Forces of Staphylococcus aureus to Central Venous Catheters by Single-Cell Force Spectroscopy", Microscopy and Microanalysis, vol. 25, pp. 53, 2019.
Zhang, X., C. S. Gibhardt, T. Will, H. Stanisz, C. Körbel, S. Cappello, J. Dudek, M. Mitkovski, M. W. Laschke, T. Simmen, et al., "Redox signals at the ER-mitochondria interface control melanoma Progression", EMBO Journal, vol. 38, pp. e100871, 2019.
Munief, W.-M., X. Lu, T. Teucke, J. Wilhelm, A. Britz, F. Hempel, R. Lanche, M. Schwartz, K. Yan J Law, S. Grandthyll, et al., "Reduced graphene oxide biosensor platform for the detection of NT-proBNP biomarker in its clinical range", Biosensors and Bioelectronics , vol. 126, pp. 136, 2019.
Folz, F., L. Wettmann, G. Morigi, and K. Kruse, "Sound of an axon's growth", Phys. Rev. E, vol. 99, pp. 050401(R), May, 2019.
Nazarieh, M., M. Hamed, C. Spaniol, T. Will, and V. Helms, "TFmiR2: Constructing and analyzing disease-, tissue- and process-specific transcription factor and microRNA co-regulatory networks", Bioinformatics, vol. 36, pp. 2300, 2019.
2017
Stefanic, M., K. Ward, H. Tawfik, R. Seemann, V. Baulin, Y. Guo, J-B. Fleury, and C. Drouet, "Apatite nanoparticles strongly improve red blood cell cryopreservation by mediating trehalose delivery via enhanced membrane permeation", Biomaterials, vol. 140, pp. 138–149, 2017.
Schenkelberger, M., S. Shanak, M. Finkler, E. G. Worst, V. Noireaux, V. Helms, and A. Ott, "Expression regulation by a methyl-CpG binding domain in an E. coli based, cell-free TX-TL system", Physical Biology, vol. 14, pp. 026002, 2017.
Dahmke, I. N., A. Verch, J. Hermannsdörfer, D. B. Peckys, R. S. Weatherup, S. Hofmann, and N. de Jonge, "Graphene Liquid Enclosure for Single-Molecule Analysis of Membrane Proteins in Whole Cells Using Electron Microscopy", ACS Nano, vol. 11, pp. 11108-11117, 2017.
Weber, I., C. Appert-Rolland, G. Schehr, and L. Santen, "Non-equilibrium fluctuations of a semi-flexible filament driven by active cross-linkers", EPL, vol. 120, 2017.
Weingärtner, O., I. Bogeski, C. Kummerow, SH. Schirmer, C. Husche, T. Vanmierlo, G. Wagenpfeil, M. Hoth, M. Böhm, D. Lütjohann, et al., "Plant sterol ester diet supplementation increases serum plant sterols and markers of cholesterol synthesis, but has no effect on total cholesterol levels.", The Journal of Steroid Biochemistry and Molecular Biology, vol. 169, pp. 219-225, 2017.
Weingärtner, O., I. Bogeski, C. Kummerow, SH. Schirmer, C. Husche, T. Vanmierlo, G. Wagenpfeil, M. Hoth, M. Böhm, D. Lütjohann, et al., "Plant sterol ester diet supplementation increases serum plant sterols and markers of cholesterol synthesis, but has no effect on total cholesterol levels.", The Journal of Steroid Biochemistry and Molecular Biology, vol. 169, pp. 219-225, 2017.
Will, T., and V. Helms, "Rewiring of the inferred protein interactome during blood development studied with the tool PPICompare", BMC Systems Biology, vol. 11, pp. 44, 2017.
Peckys, D. B., C. Stoerger, L. Latta, U. Wissenbach, V. Flockerzi, and N. de Jonge, "The stoichiometry of the TMEM16A ion channel determined in intact plasma membranes of COS-7 cells using liquid-phase electron microscopy", Journal of Structural Biology, vol. 199, pp. 102 - 113, 2017.
2016
Saul, S., C. S. Gibhardt, B. Schmidt, A. Lis, B. Pasieka, D. Conrad, P. Jung, R. Gaupp, B. Wonnenberg, E. Diler, et al., "A calcium-redox feedback loop controls human monocyte immune responses: The role of ORAI Ca2+ channels", Science Signaling, vol. 9, pp. ra26–ra26, 2016.
Welter, M., T. Fredrich, H. Rinneberg, and H. Rieger, "Computational Model for Tumor Oxygenation Applied to Clinical Data on Breast Tumor Hemoglobin Concentrations Suggests Vascular Dilatation and Compression", PLoS ONE, vol. 11, pp. e0161267, 2016.
Welter, M., T. Fredrich, and H. Rieger, "Computer Simulations of the Tumor Vasculature: Applications to Interstitial Fluid Flow, Drug Delivery, and Oxygen Supply", Systems Biology of the Tumor Environment: Quantitative Modeling and Simulation, Heidelberg, New York, Springer, 2016.
Welter, M., and H. Rieger, "Computer Simulations of the Tumor Vasculature: Applications to Interstitial Fluid Flow, Drug Delivery, and Oxygen Supply.", Systems Biology of Tumor Microenvironment. Advances in Experimental Medicine and Biology, Cham, Springer, pp. 31-72, 2016.
Nazarieh, M., A. Wiese, T. Will, M. Hamed, and V. Helms, "Identification of Key Player Genes in Gene Regulatory Networks", BMC Systems Biology, vol. 10, 2016.
Nazarieh, M., A. Wiese, T. Will, M. Hamed, and V. Helms, "Identification of Key Player Genes in Gene Regulatory Networks", BMC Systems Biology, vol. 10, 2016.
Kann, B., C. Spengler, K. Coradini, L. A. Rigo, M. L. Bennink, K. Jacobs, H. L. Offerhaus, R. C. R. Beck, and M. Windbergs, "Intracellular Delivery of Poorly Soluble Polyphenols: Elucidating the Interplay of Self-Assembling Nanocarriers and Human Chondrocytes", Analytical Chemistry, vol. 88, 2016.
Rieger, H., T. Fredrich, and M. Welter, "Physics of the tumor vasculature: Theory and experiment", The European Physical Journal Plus, vol. 131, pp. 1–24, 2016.
Will, T., and V. Helms, "PPIXpress: construction of condition-specific protein interaction networks based on transcript expression.", Bioinformatics, vol. 32, pp. 571-8, 2016.
Worst, E. G., M. P. Exner, A. De Simone, M. Schenkelberger, V. Noireaux, N. Budisa, and A. Ott, "Residue-specific Incorporation of Noncanonical Amino Acids into Model Proteins Using an Escherichia coli Cell-free Transcription-translation System", J. Vis. Exp., vol. 114, pp. e54273, 2016.
Wollrab, V., R. Thiagarajan, A. Wald, K. Kruse, and D. Riveline, "Still and rotating myosin clusters determine cytokinetic ring constriction", Nat Commun, vol. 7, pp. 11860, 2016.
Wollrab, V., R. Thiagarajan, A. Wald, K. Kruse, and D. Riveline, "Still and rotating myosin clusters determine cytokinetic ring constriction", Nat Commun, vol. 7, pp. 11860, 2016.
Worst, E. G., P. Zimmer, E. Wollrab, K. Kruse, and A. Ott, "Unbounded growth patterns of reproducing, competing polymers – similarities to biological evolution", New Journal of Physics, vol. 18, pp. 103003, 2016.
Worst, E. G., P. Zimmer, E. Wollrab, K. Kruse, and A. Ott, "Unbounded growth patterns of reproducing, competing polymers – similarities to biological evolution", New Journal of Physics, vol. 18, pp. 103003, 2016.
2015
Weber, M. - T., M. Hannig, S. Pötschke, F. Höhne, and C. Hannig, "Application of Plant Extracts for the Prevention of Dental Erosion: An in situ/in vitro Study", Caries Research, vol. 49, pp. 477–487, 2015.
Worst, E. G., M. P. Exner, A. De Simone, M. Schenkelberger, V. Noireaux, N. Budisa, and A. Ott, "Cell-free expression with the toxic amino acid canavanine", Bioorganic & Medicinal Chemistry Letters, vol. 25, pp. 3658–3660, 2015.
Kettner, M., A. Schmidt, M. Windgassen, P. Schmidt, C. Wagner, and F. Ramsthaler, "Impact height and wall distance in bloodstain pattern analysis—what patterns of round bloodstains can tell us", International Journal of Legal Medicine, vol. 129, pp. 133-140, 2015.
Kettner, M., A. Schmidt, M. Windgassen, P. Schmidt, C. Wagner, and F. Ramsthaler, "Impact height and wall distance in bloodstain pattern analysis—what patterns of round bloodstains can tell us", International Journal of Legal Medicine, vol. 129, pp. 133-140, 2015.
Delle, L. E., C. Huck, M. Bäcker, F. Müller, S. Grandthyll, K. Jacobs, R. Lilischkis, X. T. Vu, M. J. Schöning, P. Wagner, et al., "Impedimetric immunosensor for the detection of histamine based on reduced graphene oxide", physica status solidi (a), vol. 212, pp. 1327–1334, 2015.
Delle, L. E., C. Huck, M. Bäcker, F. Müller, S. Grandthyll, K. Jacobs, R. Lilischkis, X. T. Vu, M. J. Schöning, P. Wagner, et al., "Impedimetric immunosensor for the detection of histamine based on reduced graphene oxide", physica status solidi (a), vol. 212, pp. 1327–1334, 2015.
Rieger, H., and M. Welter, "Integrative models of vascular remodeling during tumor growth", Wiley Interdisciplinary Reviews: Systems Biology and Medicine, vol. 7, pp. 113–129, 2015.
Wittpahl, G., I. Kölling-Speer, S. Basche, E. Herrmann, M. Hannig, K. Speer, and C. Hannig, "The Polyphenolic Composition of Cistus incanus Herbal Tea and Its Antibacterial and Anti-adherent Activity against Streptococcus mutans", Planta Medica, vol. 81, pp. 1727-1735, 2015.
Flormann, D., E. Kuder, P. Lipp, C. Wagner, and L. Kaestner, "Is there a role of C-reactive protein in red blood cell aggregation?", International Journal of Laboratory Hematology, vol. 37, pp. 474–482, 2015.
2013
Wagner, C., P. Steffen, and S. Svetina, "Aggregation of Red Blood Cells: From Rouleaux to Clot Formation", Comptes Rendues en Physique, vol. 14, pp. 459, 2013.
Müller, F., M. Lessel, S. Grandthyll, K. Jacobs, S. Hüfner, S. Gsell, M. Weinl, and M. Schreck, "Increasing the Wear Resistance by Interstitial Alloying with Boron via Chemical Vapor Deposition", Langmuir, vol. 29, pp. 4543-4550, 2013.
Welter, M., and H. Rieger, "Interstitial Fluid Flow and Drug Delivery in Vascularized Tumors: A Computational Model", PLoS ONE, vol. 8, pp. e70395, 2013.
Yao, W., X. Cai, C. Liu, Y. Qin, H. Cheng, S. Ji, W. Xu, C. Wu, T. Chen, J. Xu, et al., "Profilin 1 potentiates apoptosis induced by staurosporine in cancer cells", Curr. Mol. Med., vol. 13, pp. 417-28, 2013.
Steffen, P., C. Verdier, and C. Wagner, "Quantification of Depletion-Induced Adhesion of Red Blood Cells", Phys. Rev. Lett., vol. 110: American Physical Society, pp. 018102, 2013.
Minetti, G., S. Egeé, D. Mörsdorf, P. Steffen, A. Makhro, C. Achilli, A. Ciana, J. Wang, G. Bouyer, I. Bernhardt, et al., "Red cell investigations: Art and artefacts", Blood Reviews, vol. 27, pp. 91–101, 2013.
Minetti, G., S. Egeé, D. Mörsdorf, P. Steffen, A. Makhro, C. Achilli, A. Ciana, J. Wang, G. Bouyer, I. Bernhardt, et al., "Red cell investigations: Art and artefacts", Blood Reviews, vol. 27, pp. 91–101, 2013.
Brust, M., C. Schaefer, R. Doerr, L. Pan, M. Garcia, P. E. Arratia, and C. Wagner, "Rheology of Human Blood Plasma: Viscoelastic Versus Newtonian Behavior", Phys. Rev. Lett., vol. 110, pp. 078305 , 2013.

 

 

 

 

 

 

 

 

 

 

 

 

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